A0A182WD96 protein (Anopheles minimus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A182WD96

Uncharacterized protein. (977 aa)

Predicted Functional Partners:

A0A182VRF5

0.999

A0A182VTQ2

0.999

A0A182W221

0.999

A0A182WDP2

0.999

A0A182VTB1

0.998

A0A182WCC9

0.998

A0A182WGD7

0.998

A0A182WAN9

0.997

A0A182WHC3

0.990

A0A182VV34

0.989

Your Current Organism:

Anopheles minimus

NCBI taxonomy Id: 112268
Other names: A. minimus, Anopheles minimus sensu stricto

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A182VRF5	A0A182VTB1	Helicase ATP-binding domain-containing protein.	General transcription factor IIH subunit.	0.999
A0A182VRF5	A0A182VTQ2	Helicase ATP-binding domain-containing protein.	PID domain-containing protein.	0.999
A0A182VRF5	A0A182VV34	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.984
A0A182VRF5	A0A182W221	Helicase ATP-binding domain-containing protein.	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.998
A0A182VRF5	A0A182WAN9	Helicase ATP-binding domain-containing protein.	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	0.997
A0A182VRF5	A0A182WCC9	Helicase ATP-binding domain-containing protein.	HTH TFE/IIEalpha-type domain-containing protein.	0.997
A0A182VRF5	A0A182WD96	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.999
A0A182VRF5	A0A182WDP2	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.999
A0A182VRF5	A0A182WGD7	Helicase ATP-binding domain-containing protein.	RING-type domain-containing protein.	0.998
A0A182VRF5	A0A182WHC3	Helicase ATP-binding domain-containing protein.	Uncharacterized protein; Belongs to the cyclin family.	0.996
A0A182VTB1	A0A182VRF5	General transcription factor IIH subunit.	Helicase ATP-binding domain-containing protein.	0.999
A0A182VTB1	A0A182VTQ2	General transcription factor IIH subunit.	PID domain-containing protein.	0.999
A0A182VTB1	A0A182VV34	General transcription factor IIH subunit.	Uncharacterized protein.	0.985
A0A182VTB1	A0A182W221	General transcription factor IIH subunit.	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.999
A0A182VTB1	A0A182WAN9	General transcription factor IIH subunit.	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	0.997
A0A182VTB1	A0A182WCC9	General transcription factor IIH subunit.	HTH TFE/IIEalpha-type domain-containing protein.	0.997
A0A182VTB1	A0A182WD96	General transcription factor IIH subunit.	Uncharacterized protein.	0.998
A0A182VTB1	A0A182WDP2	General transcription factor IIH subunit.	Uncharacterized protein.	0.999
A0A182VTB1	A0A182WGD7	General transcription factor IIH subunit.	RING-type domain-containing protein.	0.999
A0A182VTB1	A0A182WHC3	General transcription factor IIH subunit.	Uncharacterized protein; Belongs to the cyclin family.	0.991