STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000422445_00614Unannotated protein. (412 aa)    
Predicted Functional Partners:
GCA_000422445_03092
Unannotated protein.
  
  
 0.821
GCA_000422445_00545
Unannotated protein.
  
  
 0.793
GCA_000422445_02614
Unannotated protein.
  
  
 0.743
GCA_000422445_02279
Unannotated protein.
  
  
 0.646
GCA_000422445_01052
Unannotated protein.
  
    0.473
GCA_000422445_01048
Unannotated protein.
  
    0.462
GCA_000422445_02072
Unannotated protein.
  
  
 0.457
GCA_000422445_02314
Unannotated protein.
  
     0.446
GCA_000422445_04375
Unannotated protein.
  
    0.444
GCA_000422445_04361
Unannotated protein.
  
  
  0.436
Your Current Organism:
Paenibacillus assamensis
NCBI taxonomy Id: 1122916
Other names: P. assamensis DSM 18201, Paenibacillus assamensis DSM 18201
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.