STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000422445_02076Unannotated protein. (261 aa)    
Predicted Functional Partners:
GCA_000422445_01404
Unannotated protein.
  
 0.948
GCA_000422445_02078
Unannotated protein.
 
    0.852
GCA_000422445_01725
Unannotated protein.
  
 0.833
GCA_000422445_02077
Unannotated protein.
  
  
 0.823
GCA_000422445_01618
Unannotated protein.
  
 
 0.788
GCA_000422445_02073
Unannotated protein.
 
     0.763
GCA_000422445_02074
Unannotated protein.
       0.707
GCA_000422445_01125
Unannotated protein.
  
     0.702
GCA_000422445_02075
Unannotated protein.
       0.688
GCA_000422445_01127
Unannotated protein.
  
 
   0.669
Your Current Organism:
Paenibacillus assamensis
NCBI taxonomy Id: 1122916
Other names: P. assamensis DSM 18201, Paenibacillus assamensis DSM 18201
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.