STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000378385_04386Unannotated protein. (298 aa)    
Predicted Functional Partners:
GCA_000378385_04387
Unannotated protein.
  0.960
GCA_000378385_06304
Unannotated protein.
  
  0.924
GCA_000378385_06455
Unannotated protein.
  
  0.920
GCA_000378385_02576
Unannotated protein.
  
  0.891
GCA_000378385_04385
Unannotated protein.
  0.869
GCA_000378385_04804
Unannotated protein.
 
  0.867
GCA_000378385_00171
Unannotated protein.
  0.861
GCA_000378385_06134
Unannotated protein.
  0.860
GCA_000378385_05072
Unannotated protein.
 
  0.855
GCA_000378385_00286
Unannotated protein.
 
  0.854
Your Current Organism:
Paenibacillus daejeonensis
NCBI taxonomy Id: 1122917
Other names: P. daejeonensis DSM 15491, Paenibacillus daejeonensis DSM 15491
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.