STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000381905_03371Unannotated protein. (285 aa)    
Predicted Functional Partners:
GCA_000381905_03850
Unannotated protein.
    
 0.659
GCA_000381905_01218
Unannotated protein.
  
  
 
0.567
GCA_000381905_03369
Unannotated protein.
       0.557
GCA_000381905_03370
Unannotated protein.
       0.488
GCA_000381905_00249
Unannotated protein.
  
  
  0.432
GCA_000381905_03848
Unannotated protein.
    
 0.431
GCA_000381905_02897
Unannotated protein.
  
 0.419
GCA_000381905_03847
Unannotated protein.
     
 0.418
GCA_000381905_03849
Unannotated protein.
     
 0.402
Your Current Organism:
Paenibacillus fonticola
NCBI taxonomy Id: 1122918
Other names: P. fonticola DSM 21315, Paenibacillus fonticola DSM 21315
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.