STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000381905_04675Unannotated protein. (495 aa)    
Predicted Functional Partners:
GCA_000381905_01948
Unannotated protein.
 
     0.752
GCA_000381905_01576
Unannotated protein.
 
     0.750
GCA_000381905_01563
Unannotated protein.
 
  
  0.708
GCA_000381905_01614
Unannotated protein.
 
   
 0.698
GCA_000381905_01827
Unannotated protein.
  
     0.693
GCA_000381905_01568
Unannotated protein.
 
   
 0.676
GCA_000381905_01632
Unannotated protein.
 
     0.676
GCA_000381905_01527
Unannotated protein.
 
 
 0.664
GCA_000381905_02704
Unannotated protein.
  
  
  0.613
GCA_000381905_01627
Unannotated protein.
 
     0.599
Your Current Organism:
Paenibacillus fonticola
NCBI taxonomy Id: 1122918
Other names: P. fonticola DSM 21315, Paenibacillus fonticola DSM 21315
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.