STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000380965_01844Unannotated protein. (644 aa)    
Predicted Functional Partners:
GCA_000380965_03619
Unannotated protein.
 
     0.761
GCA_000380965_00830
Unannotated protein.
 
     0.737
GCA_000380965_03620
Unannotated protein.
 
     0.736
GCA_000380965_02699
Unannotated protein.
 
     0.650
GCA_000380965_04952
Unannotated protein.
 
   
 0.553
GCA_000380965_02284
Unannotated protein.
 
   
 0.522
GCA_000380965_02617
Unannotated protein.
  
     0.490
GCA_000380965_04120
Unannotated protein.
  
     0.486
GCA_000380965_02645
Unannotated protein.
  
     0.484
GCA_000380965_01845
Unannotated protein.
       0.473
Your Current Organism:
Paenibacillus ginsengihumi
NCBI taxonomy Id: 1122919
Other names: P. ginsengihumi DSM 21568, Paenibacillus ginsengihumi DCY16, Paenibacillus ginsengihumi DSM 21568
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.