STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000380965_01954Unannotated protein. (120 aa)    
Predicted Functional Partners:
GCA_000380965_03375
Unannotated protein.
 
    0.818
GCA_000380965_03197
Unannotated protein.
 
    0.812
GCA_000380965_01955
Unannotated protein.
       0.743
GCA_000380965_00227
Unannotated protein.
  
     0.711
GCA_000380965_03462
Unannotated protein.
  
     0.707
GCA_000380965_01744
Unannotated protein.
  
    0.699
GCA_000380965_01957
Unannotated protein.
       0.637
GCA_000380965_01260
Unannotated protein.
  
     0.598
GCA_000380965_01379
Unannotated protein.
  
     0.582
GCA_000380965_01470
Unannotated protein.
  
    0.581
Your Current Organism:
Paenibacillus ginsengihumi
NCBI taxonomy Id: 1122919
Other names: P. ginsengihumi DSM 21568, Paenibacillus ginsengihumi DCY16, Paenibacillus ginsengihumi DSM 21568
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.