STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000422465_00684Unannotated protein. (251 aa)    
Predicted Functional Partners:
GCA_000422465_00683
Unannotated protein.
 
 
 0.994
GCA_000422465_00682
Unannotated protein.
 
  
 0.939
GCA_000422465_00687
Unannotated protein.
 
     0.904
GCA_000422465_02429
Unannotated protein.
  
 
 0.877
GCA_000422465_00681
Unannotated protein.
 
     0.825
GCA_000422465_00686
Unannotated protein.
 
     0.789
GCA_000422465_00685
Unannotated protein.
 
     0.779
GCA_000422465_00737
Unannotated protein.
  
     0.762
GCA_000422465_01665
Unannotated protein.
 
     0.762
GCA_000422465_05947
Unannotated protein.
  
   
 0.762
Your Current Organism:
Paenibacillus harenae
NCBI taxonomy Id: 1122920
Other names: P. harenae DSM 16969, Paenibacillus harenae DSM 16969
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.