STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000422465_04239Unannotated protein. (300 aa)    
Predicted Functional Partners:
GCA_000422465_04240
Unannotated protein.
 
 0.997
GCA_000422465_04368
Unannotated protein.
     
 0.956
GCA_000422465_04370
Unannotated protein.
    
 0.955
GCA_000422465_01470
Unannotated protein.
   
 0.951
GCA_000422465_05897
Unannotated protein.
   
 0.924
GCA_000422465_04373
Unannotated protein.
     
 0.918
GCA_000422465_02170
Unannotated protein.
    
  0.908
GCA_000422465_02168
Unannotated protein.
    
  0.906
GCA_000422465_02169
Unannotated protein.
    
  0.906
GCA_000422465_02923
Unannotated protein.
 
 
 0.832
Your Current Organism:
Paenibacillus harenae
NCBI taxonomy Id: 1122920
Other names: P. harenae DSM 16969, Paenibacillus harenae DSM 16969
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.