STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000374825_02253Unannotated protein. (288 aa)    
Predicted Functional Partners:
GCA_000374825_02254
Unannotated protein.
 
 
  0.962
GCA_000374825_02255
Unannotated protein.
 
  
  0.927
GCA_000374825_02261
Unannotated protein.
     
 
0.905
GCA_000374825_00844
Unannotated protein.
  
 
  0.877
GCA_000374825_00856
Unannotated protein.
  
 
  0.863
GCA_000374825_02247
Unannotated protein.
  
 
  0.863
GCA_000374825_02484
Unannotated protein.
  
 
  0.862
GCA_000374825_00455
Unannotated protein.
 
 
  0.857
GCA_000374825_01398
Unannotated protein.
 
 
  0.857
GCA_000374825_03730
Unannotated protein.
  
 
  0.856
Your Current Organism:
Paenibacillus sanguinis
NCBI taxonomy Id: 1122925
Other names: P. sanguinis 2301083 = DSM 16941, Paenibacillus sanguinis 2301083, Paenibacillus sanguinis 2301083 = DSM 16941, Paenibacillus sanguinis DSM 16941, Paenibacillus sanguinis DSM 16941 = 2301083
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.