STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000374825_04090Unannotated protein. (174 aa)    
Predicted Functional Partners:
GCA_000374825_01529
Unannotated protein.
   
 0.891
GCA_000374825_04451
Unannotated protein.
   
 0.891
GCA_000374825_00681
Unannotated protein.
  
  
 0.864
GCA_000374825_01808
Unannotated protein.
 
 
0.729
GCA_000374825_04091
Unannotated protein.
       0.578
GCA_000374825_03082
Unannotated protein.
   
 
 0.519
GCA_000374825_00239
Unannotated protein.
    
   0.489
GCA_000374825_03108
Unannotated protein.
  
  
 0.483
GCA_000374825_04092
Unannotated protein.
       0.478
GCA_000374825_04086
Unannotated protein.
     
 0.468
Your Current Organism:
Paenibacillus sanguinis
NCBI taxonomy Id: 1122925
Other names: P. sanguinis 2301083 = DSM 16941, Paenibacillus sanguinis 2301083, Paenibacillus sanguinis 2301083 = DSM 16941, Paenibacillus sanguinis DSM 16941, Paenibacillus sanguinis DSM 16941 = 2301083
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.