STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000425125_00951Unannotated protein. (172 aa)    
Predicted Functional Partners:
GCA_000425125_00952
Unannotated protein.
       0.773
GCA_000425125_00949
Unannotated protein.
       0.733
GCA_000425125_00950
Unannotated protein.
       0.731
GCA_000425125_00948
Unannotated protein.
       0.729
GCA_000425125_00947
Unannotated protein.
       0.728
GCA_000425125_00946
Unannotated protein.
       0.697
GCA_000425125_02928
Unannotated protein.
 
  
 0.682
GCA_000425125_00792
Unannotated protein.
    
  0.649
GCA_000425125_00356
Unannotated protein.
    
  0.640
GCA_000425125_00953
Unannotated protein.
       0.590
Your Current Organism:
Paenibacillus taiwanensis
NCBI taxonomy Id: 1122926
Other names: P. taiwanensis DSM 18679, Paenibacillus taiwanensis DSM 18679
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.