STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000374845_02234Unannotated protein. (264 aa)    
Predicted Functional Partners:
GCA_000374845_05115
Unannotated protein.
 
 
  0.778
GCA_000374845_01104
Unannotated protein.
    
 0.753
GCA_000374845_00273
Unannotated protein.
  
 
 0.701
GCA_000374845_02104
Unannotated protein.
  
 
 0.701
GCA_000374845_01539
Unannotated protein.
    
  0.514
GCA_000374845_03462
Unannotated protein.
    
  0.514
GCA_000374845_05693
Unannotated protein.
    
  0.514
GCA_000374845_03287
Unannotated protein.
 
 
 0.487
GCA_000374845_01106
Unannotated protein.
    
 0.468
GCA_000374845_03752
Unannotated protein.
   
 0.461
Your Current Organism:
Paenibacillus terrigena
NCBI taxonomy Id: 1122927
Other names: P. terrigena DSM 21567, Paenibacillus terrigena DSM 21567
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.