STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000422925_00521Unannotated protein. (173 aa)    
Predicted Functional Partners:
GCA_000422925_02118
Unannotated protein.
 
  
  0.783
GCA_000422925_00264
Unannotated protein.
    
  0.728
GCA_000422925_01987
Unannotated protein.
    
  0.728
GCA_000422925_03119
Unannotated protein.
    
  0.675
GCA_000422925_01945
Unannotated protein.
  
 
  0.653
GCA_000422925_03787
Unannotated protein.
  
 
  0.653
GCA_000422925_00522
Unannotated protein.
       0.570
GCA_000422925_00041
Unannotated protein.
  
    0.565
GCA_000422925_03070
Unannotated protein.
 
  
 0.519
GCA_000422925_01865
Unannotated protein.
   
  0.504
Your Current Organism:
Paludibacterium yongneupense
NCBI taxonomy Id: 1122928
Other names: P. yongneupense DSM 18731, Paludibacterium yongneupense DSM 18731
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.