STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000422925_02074Unannotated protein. (105 aa)    
Predicted Functional Partners:
GCA_000422925_03024
Unannotated protein.
  
 0.995
GCA_000422925_03023
Unannotated protein.
  
 
 0.994
GCA_000422925_01988
Unannotated protein.
    
 0.986
GCA_000422925_03721
Unannotated protein.
    
 0.986
GCA_000422925_03019
Unannotated protein.
  
 
 0.960
GCA_000422925_02295
Unannotated protein.
    
 0.953
GCA_000422925_02658
Unannotated protein.
   
 0.904
GCA_000422925_03021
Unannotated protein.
  
 
 0.893
GCA_000422925_00227
Unannotated protein.
     
 0.888
GCA_000422925_00269
Unannotated protein.
    
 
 0.867
Your Current Organism:
Paludibacterium yongneupense
NCBI taxonomy Id: 1122928
Other names: P. yongneupense DSM 18731, Paludibacterium yongneupense DSM 18731
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.