STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC85537.1Stage III sporulation protein AH. (183 aa)    
Predicted Functional Partners:
SMC85541.1
Stage III sporulation protein AG.
 
  
 0.998
SMC85574.1
Stage III sporulation protein AE.
 
  
 0.954
SMC85601.1
Stage III sporulation protein AA.
 
  
 0.953
SMC55841.1
Stage II sporulation protein P.
  
   
 0.886
SMC85585.1
Stage III sporulation protein AC.
 
  
 0.879
SMC85578.1
Stage III sporulation protein AD.
 
  
 0.854
SMC85592.1
Stage III sporulation protein AB (spore_III_AB).
  
  
 0.805
SMC73202.1
Stage II sporulation protein E.
  
   
 0.804
SMC40381.1
LysM domain-containing protein.
  
  
 0.775
SMC55266.1
Putative DeoR family transcriptional regulator, stage III sporulation protein D.
  
  
 0.771
Your Current Organism:
Papillibacter cinnamivorans
NCBI taxonomy Id: 1122930
Other names: P. cinnamivorans DSM 12816, Papillibacter cinnamivorans DSM 12816
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