STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC87591.1Glyoxylase, beta-lactamase superfamily II. (329 aa)    
Predicted Functional Partners:
SMC68739.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
  
 0.926
SMC76426.1
CoA-disulfide reductase; Belongs to the sulfur carrier protein TusA family.
  
 0.926
SMC87596.1
Glyoxylase, beta-lactamase superfamily II.
 
    
0.787
SMC42891.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
  
 0.657
SMC76452.1
Rhodanese-related sulfurtransferase.
  
 0.599
SMC68929.1
Glyoxylase, beta-lactamase superfamily II.
  
  
  0.522
SMC75998.1
Lactoylglutathione lyase.
    
 0.472
ybeY
Probable rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
    
 
 0.463
truA
tRNA pseudouridine38-40 synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
   
 
 0.457
rsmH
16S rRNA (cytosine1402-N4)-methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
   
   0.454
Your Current Organism:
Papillibacter cinnamivorans
NCBI taxonomy Id: 1122930
Other names: P. cinnamivorans DSM 12816, Papillibacter cinnamivorans DSM 12816
Server load: low (10%) [HD]