Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SMC38022.1 | SMC76167.1 | SAMN02745168_0586 | SAMN02745168_2364 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.986 |
SMC38022.1 | SMC87617.1 | SAMN02745168_0586 | SAMN02745168_0175 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | Radical SAM superfamily enzyme, MoaA/NifB/PqqE/SkfB family. | 0.602 |
SMC38022.1 | SMC87620.1 | SAMN02745168_0586 | SAMN02745168_0176 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | Hypothetical protein. | 0.602 |
SMC55165.1 | SMC87620.1 | SAMN02745168_1434 | SAMN02745168_0176 | LPXTG-site transpeptidase (sortase) family protein. | Hypothetical protein. | 0.467 |
SMC76167.1 | SMC38022.1 | SAMN02745168_2364 | SAMN02745168_0586 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.986 |
SMC76167.1 | SMC87617.1 | SAMN02745168_2364 | SAMN02745168_0175 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | Radical SAM superfamily enzyme, MoaA/NifB/PqqE/SkfB family. | 0.478 |
SMC76167.1 | SMC87620.1 | SAMN02745168_2364 | SAMN02745168_0176 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | Hypothetical protein. | 0.478 |
SMC87617.1 | SMC38022.1 | SAMN02745168_0175 | SAMN02745168_0586 | Radical SAM superfamily enzyme, MoaA/NifB/PqqE/SkfB family. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.602 |
SMC87617.1 | SMC76167.1 | SAMN02745168_0175 | SAMN02745168_2364 | Radical SAM superfamily enzyme, MoaA/NifB/PqqE/SkfB family. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.478 |
SMC87617.1 | SMC87620.1 | SAMN02745168_0175 | SAMN02745168_0176 | Radical SAM superfamily enzyme, MoaA/NifB/PqqE/SkfB family. | Hypothetical protein. | 0.611 |
SMC87620.1 | SMC38022.1 | SAMN02745168_0176 | SAMN02745168_0586 | Hypothetical protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.602 |
SMC87620.1 | SMC55165.1 | SAMN02745168_0176 | SAMN02745168_1434 | Hypothetical protein. | LPXTG-site transpeptidase (sortase) family protein. | 0.467 |
SMC87620.1 | SMC76167.1 | SAMN02745168_0176 | SAMN02745168_2364 | Hypothetical protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.478 |
SMC87620.1 | SMC87617.1 | SAMN02745168_0176 | SAMN02745168_0175 | Hypothetical protein. | Radical SAM superfamily enzyme, MoaA/NifB/PqqE/SkfB family. | 0.611 |