STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC87681.1Glutamate synthase domain-containing protein 1. (366 aa)    
Predicted Functional Partners:
SMC87673.1
Glutamate synthase domain-containing protein 3.
  0.999
SMC87680.1
Glutamate synthase domain-containing protein 2; Belongs to the glutamate synthase family.
 
 0.993
SMC64280.1
Dihydropyrimidine dehydrogenase (NAD+) subunit PreA.
  
 0.991
SMC90790.1
Glutamate synthase (NADPH/NADH) small chain.
  
 0.974
SMC80692.1
NADPH-dependent glutamate synthase beta chain.
  
 0.974
SMC87676.1
Pyridine nucleotide-disulphide oxidoreductase.
 
  
 0.952
carB
Carbamoyl-phosphate synthase large subunit; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. Belongs to the diaminopimelate epimerase family.
  
 
 0.940
SMC87678.1
Carbon-monoxide dehydrogenase iron sulfur subunit.
 
  
 0.907
SMC86912.1
Glutamate synthase domain-containing protein 2.
 
 0.896
SMC90076.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.842
Your Current Organism:
Papillibacter cinnamivorans
NCBI taxonomy Id: 1122930
Other names: P. cinnamivorans DSM 12816, Papillibacter cinnamivorans DSM 12816
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