STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC90145.1Protein of unknown function. (250 aa)    
Predicted Functional Partners:
SMC90129.1
Prenyltransferase, beta subunit.
     0.992
SMC90157.1
Energy-coupling factor transport system permease protein.
 
     0.951
SMC90228.1
Energy-coupling factor transport system ATP-binding protein.
 
     0.951
SMC90277.1
Energy-coupling factor transport system substrate-specific component.
 
     0.951
SMC90605.1
Mannose-1-phosphate guanylyltransferase / phosphomannomutase.
     
 0.687
SMC90288.1
Zinc-ribbon family protein.
       0.586
SMC90123.1
Spore germination protein KA.
       0.450
SMC90090.1
Hypothetical protein.
       0.444
SMC90100.1
Spore germination protein KB.
       0.444
SMC90114.1
Spore germination protein KC.
       0.444
Your Current Organism:
Papillibacter cinnamivorans
NCBI taxonomy Id: 1122930
Other names: P. cinnamivorans DSM 12816, Papillibacter cinnamivorans DSM 12816
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.