Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SMC64972.1 | SMC87549.1 | SAMN02745168_1997 | SAMN02745168_0159 | Threonine dehydratase. | 2-oxoglutarate ferredoxin oxidoreductase subunit gamma. | 0.801 |
SMC64972.1 | SMC87553.1 | SAMN02745168_1997 | SAMN02745168_0160 | Threonine dehydratase. | 2-oxoglutarate ferredoxin oxidoreductase subunit beta. | 0.801 |
SMC64972.1 | SMC90076.1 | SAMN02745168_1997 | SAMN02745168_0259 | Threonine dehydratase. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.944 |
SMC64972.1 | SMC91427.1 | SAMN02745168_1997 | SAMN02745168_0315 | Threonine dehydratase. | Pyruvate ferredoxin oxidoreductase beta subunit. | 0.801 |
SMC64972.1 | SMC91455.1 | SAMN02745168_1997 | SAMN02745168_0316 | Threonine dehydratase. | Pyruvate ferredoxin oxidoreductase alpha subunit. | 0.800 |
SMC64972.1 | SMC91477.1 | SAMN02745168_1997 | SAMN02745168_0317 | Threonine dehydratase. | Pyruvate ferredoxin oxidoreductase delta subunit. | 0.806 |
SMC64972.1 | SMC91491.1 | SAMN02745168_1997 | SAMN02745168_0318 | Threonine dehydratase. | Pyruvate ferredoxin oxidoreductase gamma subunit. | 0.801 |
SMC64972.1 | ldh | SAMN02745168_1997 | SAMN02745168_2734 | Threonine dehydratase. | Malate dehydrogenase (NAD); Catalyzes the conversion of lactate to pyruvate. | 0.831 |
SMC87549.1 | SMC64972.1 | SAMN02745168_0159 | SAMN02745168_1997 | 2-oxoglutarate ferredoxin oxidoreductase subunit gamma. | Threonine dehydratase. | 0.801 |
SMC87549.1 | SMC87553.1 | SAMN02745168_0159 | SAMN02745168_0160 | 2-oxoglutarate ferredoxin oxidoreductase subunit gamma. | 2-oxoglutarate ferredoxin oxidoreductase subunit beta. | 0.999 |
SMC87549.1 | SMC87579.1 | SAMN02745168_0159 | SAMN02745168_0167 | 2-oxoglutarate ferredoxin oxidoreductase subunit gamma. | Phosphate acetyltransferase. | 0.493 |
SMC87549.1 | SMC90076.1 | SAMN02745168_0159 | SAMN02745168_0259 | 2-oxoglutarate ferredoxin oxidoreductase subunit gamma. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.996 |
SMC87549.1 | SMC91427.1 | SAMN02745168_0159 | SAMN02745168_0315 | 2-oxoglutarate ferredoxin oxidoreductase subunit gamma. | Pyruvate ferredoxin oxidoreductase beta subunit. | 0.956 |
SMC87549.1 | SMC91455.1 | SAMN02745168_0159 | SAMN02745168_0316 | 2-oxoglutarate ferredoxin oxidoreductase subunit gamma. | Pyruvate ferredoxin oxidoreductase alpha subunit. | 0.917 |
SMC87549.1 | SMC91477.1 | SAMN02745168_0159 | SAMN02745168_0317 | 2-oxoglutarate ferredoxin oxidoreductase subunit gamma. | Pyruvate ferredoxin oxidoreductase delta subunit. | 0.513 |
SMC87549.1 | ldh | SAMN02745168_0159 | SAMN02745168_2734 | 2-oxoglutarate ferredoxin oxidoreductase subunit gamma. | Malate dehydrogenase (NAD); Catalyzes the conversion of lactate to pyruvate. | 0.502 |
SMC87549.1 | pckG | SAMN02745168_0159 | SAMN02745168_0955 | 2-oxoglutarate ferredoxin oxidoreductase subunit gamma. | Phosphoenolpyruvate carboxykinase (GTP); Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle; Belongs to the phosphoenolpyruvate carboxykinase [GTP] family. | 0.665 |
SMC87553.1 | SMC64972.1 | SAMN02745168_0160 | SAMN02745168_1997 | 2-oxoglutarate ferredoxin oxidoreductase subunit beta. | Threonine dehydratase. | 0.801 |
SMC87553.1 | SMC87549.1 | SAMN02745168_0160 | SAMN02745168_0159 | 2-oxoglutarate ferredoxin oxidoreductase subunit beta. | 2-oxoglutarate ferredoxin oxidoreductase subunit gamma. | 0.999 |
SMC87553.1 | SMC87579.1 | SAMN02745168_0160 | SAMN02745168_0167 | 2-oxoglutarate ferredoxin oxidoreductase subunit beta. | Phosphate acetyltransferase. | 0.826 |
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