STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC38282.1Recombination protein RecT. (290 aa)    
Predicted Functional Partners:
SMC38232.1
Putative phage-type endonuclease.
 
  
 0.954
SMC38273.1
Protein of unknown function.
 
     0.907
SMC38298.1
Single-strand DNA-binding protein.
     
 0.788
SMC38265.1
Hypothetical protein.
       0.774
SMC38308.1
Protein of unknown function.
       0.741
SMC38203.1
Hypothetical protein.
 
     0.634
SMC38217.1
Hypothetical protein.
       0.614
SMC38226.1
Hypothetical protein.
       0.613
SMC38210.1
Hypothetical protein.
       0.603
SMC38194.1
Hypothetical protein.
 
     0.551
Your Current Organism:
Papillibacter cinnamivorans
NCBI taxonomy Id: 1122930
Other names: P. cinnamivorans DSM 12816, Papillibacter cinnamivorans DSM 12816
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.