STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC40053.1Acyl-CoA hydrolase. (438 aa)    
Predicted Functional Partners:
SMC90076.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.856
SMC40058.1
Pimeloyl-ACP methyl ester carboxylesterase.
 
  
  0.776
SMC40046.1
ABC-type branched-chain amino acid transport system, substrate-binding protein.
 
     0.606
SMC47498.1
Citrate synthase; Belongs to the citrate synthase family.
   
 0.518
SMC56099.1
Citrate synthase; Belongs to the citrate synthase family.
   
 0.518
SMC82609.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.483
SMC87579.1
Phosphate acetyltransferase.
    
 0.459
SMC60155.1
acetyl-CoA carboxylase, biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
    
 0.440
SMC64417.1
Alcohol dehydrogenase, class IV.
  
 
 0.428
SMC68658.1
Alcohol dehydrogenase, class IV.
  
 
 0.428
Your Current Organism:
Papillibacter cinnamivorans
NCBI taxonomy Id: 1122930
Other names: P. cinnamivorans DSM 12816, Papillibacter cinnamivorans DSM 12816
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