Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SMC36934.1 | SMC40388.1 | SAMN02745168_0496 | SAMN02745168_0721 | Stage II sporulation protein GA (sporulation sigma-E factor processing peptidase); Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Stage IV sporulation protein A. | 0.756 |
| SMC36934.1 | SMC41717.1 | SAMN02745168_0496 | SAMN02745168_0821 | Stage II sporulation protein GA (sporulation sigma-E factor processing peptidase); Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Similar to stage IV sporulation protein. | 0.794 |
| SMC36934.1 | SMC41746.1 | SAMN02745168_0496 | SAMN02745168_0822 | Stage II sporulation protein GA (sporulation sigma-E factor processing peptidase); Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Sporulation protein YqfC. | 0.786 |
| SMC36934.1 | SMC41774.1 | SAMN02745168_0496 | SAMN02745168_0824 | Stage II sporulation protein GA (sporulation sigma-E factor processing peptidase); Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Sporulation integral membrane protein YlbJ. | 0.797 |
| SMC36934.1 | SMC41874.1 | SAMN02745168_0496 | SAMN02745168_0836 | Stage II sporulation protein GA (sporulation sigma-E factor processing peptidase); Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Stage II sporulation protein R. | 0.910 |
| SMC36934.1 | SMC54734.1 | SAMN02745168_0496 | SAMN02745168_1414 | Stage II sporulation protein GA (sporulation sigma-E factor processing peptidase); Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Sporulation protein YqfC/sporulation protein YabP,TIGR02892. | 0.558 |
| SMC36934.1 | SMC55266.1 | SAMN02745168_0496 | SAMN02745168_1442 | Stage II sporulation protein GA (sporulation sigma-E factor processing peptidase); Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Putative DeoR family transcriptional regulator, stage III sporulation protein D. | 0.810 |
| SMC36934.1 | SMC55841.1 | SAMN02745168_0496 | SAMN02745168_1508 | Stage II sporulation protein GA (sporulation sigma-E factor processing peptidase); Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Stage II sporulation protein P. | 0.876 |
| SMC36934.1 | SMC85601.1 | SAMN02745168_0496 | SAMN02745168_0041 | Stage II sporulation protein GA (sporulation sigma-E factor processing peptidase); Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Stage III sporulation protein AA. | 0.808 |
| SMC36934.1 | spoIIAB | SAMN02745168_0496 | SAMN02745168_1082 | Stage II sporulation protein GA (sporulation sigma-E factor processing peptidase); Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Stage II sporulation protein AB (anti-sigma F factor); Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition. | 0.903 |
| SMC40388.1 | SMC36934.1 | SAMN02745168_0721 | SAMN02745168_0496 | Stage IV sporulation protein A. | Stage II sporulation protein GA (sporulation sigma-E factor processing peptidase); Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | 0.756 |
| SMC40388.1 | SMC41717.1 | SAMN02745168_0721 | SAMN02745168_0821 | Stage IV sporulation protein A. | Similar to stage IV sporulation protein. | 0.788 |
| SMC40388.1 | SMC41774.1 | SAMN02745168_0721 | SAMN02745168_0824 | Stage IV sporulation protein A. | Sporulation integral membrane protein YlbJ. | 0.791 |
| SMC40388.1 | SMC41874.1 | SAMN02745168_0721 | SAMN02745168_0836 | Stage IV sporulation protein A. | Stage II sporulation protein R. | 0.866 |
| SMC40388.1 | SMC54734.1 | SAMN02745168_0721 | SAMN02745168_1414 | Stage IV sporulation protein A. | Sporulation protein YqfC/sporulation protein YabP,TIGR02892. | 0.781 |
| SMC40388.1 | SMC55266.1 | SAMN02745168_0721 | SAMN02745168_1442 | Stage IV sporulation protein A. | Putative DeoR family transcriptional regulator, stage III sporulation protein D. | 0.913 |
| SMC40388.1 | SMC55841.1 | SAMN02745168_0721 | SAMN02745168_1508 | Stage IV sporulation protein A. | Stage II sporulation protein P. | 0.886 |
| SMC40388.1 | SMC85601.1 | SAMN02745168_0721 | SAMN02745168_0041 | Stage IV sporulation protein A. | Stage III sporulation protein AA. | 0.908 |
| SMC40388.1 | spoIIAB | SAMN02745168_0721 | SAMN02745168_1082 | Stage IV sporulation protein A. | Stage II sporulation protein AB (anti-sigma F factor); Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition. | 0.853 |
| SMC41717.1 | SMC36934.1 | SAMN02745168_0821 | SAMN02745168_0496 | Similar to stage IV sporulation protein. | Stage II sporulation protein GA (sporulation sigma-E factor processing peptidase); Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | 0.794 |
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