STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC42686.1Prepilin-type N-terminal cleavage/methylation domain-containing protein. (144 aa)    
Predicted Functional Partners:
SMC42678.1
Type IV pilus assembly protein PilC.
 
  
 0.973
SMC42700.1
General secretion pathway protein G.
 
 
 0.973
SMC42662.1
Type IV pilus assembly protein PilB.
 
  
 0.953
SMC47795.1
Competence protein ComEC.
   
  
 0.813
SMC42693.1
Type IV pilus assembly protein PilA.
 
  
 
0.804
SMC42845.1
Leader peptidase (prepilin peptidase) / N-methyltransferase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
  
 0.765
SMC42671.1
Twitching motility protein PilT.
 
     0.691
SMC57724.1
Competence protein ComEA.
   
  
 0.674
SMC42706.1
Prepilin-type N-terminal cleavage/methylation domain-containing protein.
       0.461
SMC46795.1
DNA processing protein.
   
  
 0.444
Your Current Organism:
Papillibacter cinnamivorans
NCBI taxonomy Id: 1122930
Other names: P. cinnamivorans DSM 12816, Papillibacter cinnamivorans DSM 12816
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