STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC45656.1SH3 domain-containing protein. (305 aa)    
Predicted Functional Partners:
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
    
  0.868
guaB
IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.868
cinA
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
    
  0.815
SMC53616.1
g-D-glutamyl-meso-diaminopimelate peptidase.
    
 0.750
SMC61336.1
Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contain LysM domain.
 
  
0.649
SMC59789.1
S-layer homology domain-containing protein.
 
 
 0.615
SMC42136.1
Penicillin-binding protein 1A.
 
  
 0.572
SMC41544.1
Stage V sporulation protein D (sporulation-specific penicillin-binding protein).
  
  
 0.568
SMC45880.1
3D domain-containing protein.
 
 
 0.568
SMC45650.1
Hypothetical protein.
       0.561
Your Current Organism:
Papillibacter cinnamivorans
NCBI taxonomy Id: 1122930
Other names: P. cinnamivorans DSM 12816, Papillibacter cinnamivorans DSM 12816
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