Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SMC41544.1 | SMC42136.1 | SAMN02745168_0806 | SAMN02745168_0854 | Stage V sporulation protein D (sporulation-specific penicillin-binding protein). | Penicillin-binding protein 1A. | 0.974 |
SMC41544.1 | SMC45656.1 | SAMN02745168_0806 | SAMN02745168_0935 | Stage V sporulation protein D (sporulation-specific penicillin-binding protein). | SH3 domain-containing protein. | 0.568 |
SMC41544.1 | SMC61336.1 | SAMN02745168_0806 | SAMN02745168_1805 | Stage V sporulation protein D (sporulation-specific penicillin-binding protein). | Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contain LysM domain. | 0.789 |
SMC41544.1 | cinA | SAMN02745168_0806 | SAMN02745168_0255 | Stage V sporulation protein D (sporulation-specific penicillin-binding protein). | Nicotinamide-nucleotide amidase; Belongs to the CinA family. | 0.576 |
SMC41544.1 | guaA | SAMN02745168_0806 | SAMN02745168_0190 | Stage V sporulation protein D (sporulation-specific penicillin-binding protein). | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.573 |
SMC42136.1 | SMC41544.1 | SAMN02745168_0854 | SAMN02745168_0806 | Penicillin-binding protein 1A. | Stage V sporulation protein D (sporulation-specific penicillin-binding protein). | 0.974 |
SMC42136.1 | SMC45656.1 | SAMN02745168_0854 | SAMN02745168_0935 | Penicillin-binding protein 1A. | SH3 domain-containing protein. | 0.572 |
SMC42136.1 | SMC53616.1 | SAMN02745168_0854 | SAMN02745168_1338 | Penicillin-binding protein 1A. | g-D-glutamyl-meso-diaminopimelate peptidase. | 0.500 |
SMC42136.1 | SMC61336.1 | SAMN02745168_0854 | SAMN02745168_1805 | Penicillin-binding protein 1A. | Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contain LysM domain. | 0.520 |
SMC45650.1 | SMC45656.1 | SAMN02745168_0934 | SAMN02745168_0935 | Hypothetical protein. | SH3 domain-containing protein. | 0.561 |
SMC45656.1 | SMC41544.1 | SAMN02745168_0935 | SAMN02745168_0806 | SH3 domain-containing protein. | Stage V sporulation protein D (sporulation-specific penicillin-binding protein). | 0.568 |
SMC45656.1 | SMC42136.1 | SAMN02745168_0935 | SAMN02745168_0854 | SH3 domain-containing protein. | Penicillin-binding protein 1A. | 0.572 |
SMC45656.1 | SMC45650.1 | SAMN02745168_0935 | SAMN02745168_0934 | SH3 domain-containing protein. | Hypothetical protein. | 0.561 |
SMC45656.1 | SMC45880.1 | SAMN02745168_0935 | SAMN02745168_0953 | SH3 domain-containing protein. | 3D domain-containing protein. | 0.568 |
SMC45656.1 | SMC53616.1 | SAMN02745168_0935 | SAMN02745168_1338 | SH3 domain-containing protein. | g-D-glutamyl-meso-diaminopimelate peptidase. | 0.750 |
SMC45656.1 | SMC59789.1 | SAMN02745168_0935 | SAMN02745168_1706 | SH3 domain-containing protein. | S-layer homology domain-containing protein. | 0.615 |
SMC45656.1 | SMC61336.1 | SAMN02745168_0935 | SAMN02745168_1805 | SH3 domain-containing protein. | Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contain LysM domain. | 0.649 |
SMC45656.1 | cinA | SAMN02745168_0935 | SAMN02745168_0255 | SH3 domain-containing protein. | Nicotinamide-nucleotide amidase; Belongs to the CinA family. | 0.815 |
SMC45656.1 | guaA | SAMN02745168_0935 | SAMN02745168_0190 | SH3 domain-containing protein. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.868 |
SMC45656.1 | guaB | SAMN02745168_0935 | SAMN02745168_1109 | SH3 domain-containing protein. | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.868 |
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