Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SMC49044.1 | SMC55862.1 | SAMN02745168_1205 | SAMN02745168_1510 | Spore photoproduct lyase. | Peptidase family M23. | 0.536 |
SMC49044.1 | SMC65173.1 | SAMN02745168_1205 | SAMN02745168_2013 | Spore photoproduct lyase. | Putative Ig domain-containing protein. | 0.542 |
SMC49044.1 | SMC65191.1 | SAMN02745168_1205 | SAMN02745168_2014 | Spore photoproduct lyase. | Hypothetical protein. | 0.532 |
SMC49044.1 | SMC71353.1 | SAMN02745168_1205 | SAMN02745168_2143 | Spore photoproduct lyase. | 4Fe-4S dicluster domain-containing protein. | 0.406 |
SMC49044.1 | SMC85688.1 | SAMN02745168_1205 | SAMN02745168_0057 | Spore photoproduct lyase. | Protein of unknown function. | 0.671 |
SMC49044.1 | SMC85830.1 | SAMN02745168_1205 | SAMN02745168_0084 | Spore photoproduct lyase. | Tocopherol cyclase. | 0.592 |
SMC49044.1 | dapA | SAMN02745168_1205 | SAMN02745168_0015 | Spore photoproduct lyase. | 4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.476 |
SMC49044.1 | dapB | SAMN02745168_1205 | SAMN02745168_0016 | Spore photoproduct lyase. | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.481 |
SMC49044.1 | gpr | SAMN02745168_1205 | SAMN02745168_1665 | Spore photoproduct lyase. | Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family. | 0.595 |
SMC49044.1 | trmB | SAMN02745168_1205 | SAMN02745168_1204 | Spore photoproduct lyase. | tRNA (guanine-N7-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.566 |
SMC55862.1 | SMC49044.1 | SAMN02745168_1510 | SAMN02745168_1205 | Peptidase family M23. | Spore photoproduct lyase. | 0.536 |
SMC65173.1 | SMC49044.1 | SAMN02745168_2013 | SAMN02745168_1205 | Putative Ig domain-containing protein. | Spore photoproduct lyase. | 0.542 |
SMC65173.1 | SMC65191.1 | SAMN02745168_2013 | SAMN02745168_2014 | Putative Ig domain-containing protein. | Hypothetical protein. | 0.851 |
SMC65191.1 | SMC49044.1 | SAMN02745168_2014 | SAMN02745168_1205 | Hypothetical protein. | Spore photoproduct lyase. | 0.532 |
SMC65191.1 | SMC65173.1 | SAMN02745168_2014 | SAMN02745168_2013 | Hypothetical protein. | Putative Ig domain-containing protein. | 0.851 |
SMC71353.1 | SMC49044.1 | SAMN02745168_2143 | SAMN02745168_1205 | 4Fe-4S dicluster domain-containing protein. | Spore photoproduct lyase. | 0.406 |
SMC85688.1 | SMC49044.1 | SAMN02745168_0057 | SAMN02745168_1205 | Protein of unknown function. | Spore photoproduct lyase. | 0.671 |
SMC85830.1 | SMC49044.1 | SAMN02745168_0084 | SAMN02745168_1205 | Tocopherol cyclase. | Spore photoproduct lyase. | 0.592 |
dapA | SMC49044.1 | SAMN02745168_0015 | SAMN02745168_1205 | 4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | Spore photoproduct lyase. | 0.476 |
dapA | dapB | SAMN02745168_0015 | SAMN02745168_0016 | 4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.997 |
page 1 of 2