node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SMC35785.1 | SMC50888.1 | SAMN02745168_0433 | SAMN02745168_1312 | Flagellar motor switch protein FliM. | DNA-binding regulatory protein, YebC/PmpR family. | 0.678 |
SMC50888.1 | SMC35785.1 | SAMN02745168_1312 | SAMN02745168_0433 | DNA-binding regulatory protein, YebC/PmpR family. | Flagellar motor switch protein FliM. | 0.678 |
SMC50888.1 | SMC90852.1 | SAMN02745168_1312 | SAMN02745168_0301 | DNA-binding regulatory protein, YebC/PmpR family. | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.664 |
SMC50888.1 | SMC92009.1 | SAMN02745168_1312 | SAMN02745168_0326 | DNA-binding regulatory protein, YebC/PmpR family. | tRNA synthetases class I (M); Partial gene; manually curated. | 0.664 |
SMC50888.1 | aspS | SAMN02745168_1312 | SAMN02745168_0099 | DNA-binding regulatory protein, YebC/PmpR family. | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | 0.722 |
SMC50888.1 | aspS-2 | SAMN02745168_1312 | SAMN02745168_1620 | DNA-binding regulatory protein, YebC/PmpR family. | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | 0.757 |
SMC50888.1 | nadE | SAMN02745168_1312 | SAMN02745168_1660 | DNA-binding regulatory protein, YebC/PmpR family. | NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.734 |
SMC50888.1 | rplS | SAMN02745168_1312 | SAMN02745168_0656 | DNA-binding regulatory protein, YebC/PmpR family. | Large subunit ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.707 |
SMC50888.1 | ruvA | SAMN02745168_1312 | SAMN02745168_0002 | DNA-binding regulatory protein, YebC/PmpR family. | Holliday junction DNA helicase subunit RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.709 |
SMC50888.1 | tyrS | SAMN02745168_1312 | SAMN02745168_0019 | DNA-binding regulatory protein, YebC/PmpR family. | tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily. | 0.832 |
SMC50888.1 | ychF | SAMN02745168_1312 | SAMN02745168_2315 | DNA-binding regulatory protein, YebC/PmpR family. | Hypothetical protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. | 0.560 |
SMC90852.1 | SMC50888.1 | SAMN02745168_0301 | SAMN02745168_1312 | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. | DNA-binding regulatory protein, YebC/PmpR family. | 0.664 |
SMC90852.1 | SMC92009.1 | SAMN02745168_0301 | SAMN02745168_0326 | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. | tRNA synthetases class I (M); Partial gene; manually curated. | 0.920 |
SMC90852.1 | aspS | SAMN02745168_0301 | SAMN02745168_0099 | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | 0.619 |
SMC90852.1 | aspS-2 | SAMN02745168_0301 | SAMN02745168_1620 | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | 0.619 |
SMC90852.1 | nadE | SAMN02745168_0301 | SAMN02745168_1660 | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. | NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.430 |
SMC90852.1 | rplS | SAMN02745168_0301 | SAMN02745168_0656 | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. | Large subunit ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.488 |
SMC90852.1 | tyrS | SAMN02745168_0301 | SAMN02745168_0019 | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. | tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily. | 0.880 |
SMC90852.1 | ychF | SAMN02745168_0301 | SAMN02745168_2315 | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. | Hypothetical protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. | 0.758 |
SMC92009.1 | SMC50888.1 | SAMN02745168_0326 | SAMN02745168_1312 | tRNA synthetases class I (M); Partial gene; manually curated. | DNA-binding regulatory protein, YebC/PmpR family. | 0.664 |