Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SMC53763.1 | SMC54402.1 | SAMN02745168_1347 | SAMN02745168_1388 | 4Fe-4S dicluster domain-containing protein. | 3-oxoacyl-[acyl-carrier-protein] reductase. | 0.690 |
SMC53763.1 | SMC55793.1 | SAMN02745168_1347 | SAMN02745168_1501 | 4Fe-4S dicluster domain-containing protein. | Ankyrin repeat. | 0.767 |
SMC53763.1 | SMC86717.1 | SAMN02745168_1347 | SAMN02745168_0104 | 4Fe-4S dicluster domain-containing protein. | Peptidyl-prolyl cis-trans isomerase B (cyclophilin B); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.840 |
SMC53763.1 | SMC90076.1 | SAMN02745168_1347 | SAMN02745168_0259 | 4Fe-4S dicluster domain-containing protein. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.995 |
SMC54402.1 | SMC53763.1 | SAMN02745168_1388 | SAMN02745168_1347 | 3-oxoacyl-[acyl-carrier-protein] reductase. | 4Fe-4S dicluster domain-containing protein. | 0.690 |
SMC54402.1 | SMC55793.1 | SAMN02745168_1388 | SAMN02745168_1501 | 3-oxoacyl-[acyl-carrier-protein] reductase. | Ankyrin repeat. | 0.672 |
SMC54402.1 | SMC60077.1 | SAMN02745168_1388 | SAMN02745168_1724 | 3-oxoacyl-[acyl-carrier-protein] reductase. | [acyl-carrier-protein] S-malonyltransferase. | 0.797 |
SMC54402.1 | SMC60121.1 | SAMN02745168_1388 | SAMN02745168_1727 | 3-oxoacyl-[acyl-carrier-protein] reductase. | 3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.804 |
SMC54402.1 | SMC60144.1 | SAMN02745168_1388 | SAMN02745168_1729 | 3-oxoacyl-[acyl-carrier-protein] reductase. | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase. | 0.679 |
SMC54402.1 | SMC75074.1 | SAMN02745168_1388 | SAMN02745168_2303 | 3-oxoacyl-[acyl-carrier-protein] reductase. | DNA repair exonuclease SbcCD nuclease subunit. | 0.640 |
SMC54402.1 | SMC85702.1 | SAMN02745168_1388 | SAMN02745168_0060 | 3-oxoacyl-[acyl-carrier-protein] reductase. | MaoC like domain-containing protein. | 0.924 |
SMC54402.1 | SMC85819.1 | SAMN02745168_1388 | SAMN02745168_0083 | 3-oxoacyl-[acyl-carrier-protein] reductase. | Short-chain dehydrogenase. | 0.711 |
SMC54402.1 | SMC86717.1 | SAMN02745168_1388 | SAMN02745168_0104 | 3-oxoacyl-[acyl-carrier-protein] reductase. | Peptidyl-prolyl cis-trans isomerase B (cyclophilin B); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.626 |
SMC54402.1 | SMC90076.1 | SAMN02745168_1388 | SAMN02745168_0259 | 3-oxoacyl-[acyl-carrier-protein] reductase. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.812 |
SMC55793.1 | SMC53763.1 | SAMN02745168_1501 | SAMN02745168_1347 | Ankyrin repeat. | 4Fe-4S dicluster domain-containing protein. | 0.767 |
SMC55793.1 | SMC54402.1 | SAMN02745168_1501 | SAMN02745168_1388 | Ankyrin repeat. | 3-oxoacyl-[acyl-carrier-protein] reductase. | 0.672 |
SMC55793.1 | SMC75074.1 | SAMN02745168_1501 | SAMN02745168_2303 | Ankyrin repeat. | DNA repair exonuclease SbcCD nuclease subunit. | 0.920 |
SMC55793.1 | SMC86717.1 | SAMN02745168_1501 | SAMN02745168_0104 | Ankyrin repeat. | Peptidyl-prolyl cis-trans isomerase B (cyclophilin B); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.747 |
SMC60077.1 | SMC54402.1 | SAMN02745168_1724 | SAMN02745168_1388 | [acyl-carrier-protein] S-malonyltransferase. | 3-oxoacyl-[acyl-carrier-protein] reductase. | 0.797 |
SMC60077.1 | SMC60121.1 | SAMN02745168_1724 | SAMN02745168_1727 | [acyl-carrier-protein] S-malonyltransferase. | 3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.999 |
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