STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC54402.13-oxoacyl-[acyl-carrier-protein] reductase. (246 aa)    
Predicted Functional Partners:
SMC85702.1
MaoC like domain-containing protein.
 
 
  0.924
SMC90076.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.812
SMC60121.1
3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 0.804
SMC60077.1
[acyl-carrier-protein] S-malonyltransferase.
 0.797
SMC85819.1
Short-chain dehydrogenase.
 
 0.711
SMC53763.1
4Fe-4S dicluster domain-containing protein.
    
 0.690
SMC60144.1
3-hydroxyacyl-[acyl-carrier-protein] dehydratase.
  
 0.679
SMC55793.1
Ankyrin repeat.
   
 0.672
SMC75074.1
DNA repair exonuclease SbcCD nuclease subunit.
    
 
 0.640
SMC86717.1
Peptidyl-prolyl cis-trans isomerase B (cyclophilin B); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 
 0.626
Your Current Organism:
Papillibacter cinnamivorans
NCBI taxonomy Id: 1122930
Other names: P. cinnamivorans DSM 12816, Papillibacter cinnamivorans DSM 12816
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