STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC55614.1DRTGG domain-containing protein. (117 aa)    
Predicted Functional Partners:
SMC55607.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
   
 0.995
SMC55593.1
Hypothetical protein.
 
  
 0.916
SMC55582.1
Hypothetical protein.
 
   
 0.912
SMC55602.1
Iron only hydrogenase large subunit, C-terminal domain.
 
   
 0.912
SMC55550.1
NADP-reducing hydrogenase subunit HndB.
 
   
 0.884
SMC55557.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
   
 0.884
guaB
IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
 0.803
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
    
  0.799
SMC55640.1
Hypothetical protein.
       0.773
SMC55538.1
NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein.
     
 0.610
Your Current Organism:
Papillibacter cinnamivorans
NCBI taxonomy Id: 1122930
Other names: P. cinnamivorans DSM 12816, Papillibacter cinnamivorans DSM 12816
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