STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC56255.1Hypothetical protein. (117 aa)    
Predicted Functional Partners:
SMC56259.1
Hypothetical protein.
 
     0.797
SMC56250.1
Hypothetical protein.
       0.773
SMC57505.1
Acetyltransferase (GNAT) family protein.
  
     0.664
SMC85763.1
Hypothetical protein.
  
     0.533
SMC85769.1
Hypothetical protein.
  
     0.524
SMC86921.1
Glyoxylase, beta-lactamase superfamily II.
  
     0.440
SMC56263.1
Stage V sporulation protein AC.
       0.429
SMC50422.1
Putative amidase domain-containing protein.
  
     0.403
Your Current Organism:
Papillibacter cinnamivorans
NCBI taxonomy Id: 1122930
Other names: P. cinnamivorans DSM 12816, Papillibacter cinnamivorans DSM 12816
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.