Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SMC38022.1 | SMC56592.1 | SAMN02745168_0586 | SAMN02745168_1588 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | Protein of unknown function. | 0.893 |
| SMC38022.1 | sigA | SAMN02745168_0586 | SAMN02745168_0827 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.554 |
| SMC40199.1 | SMC56592.1 | SAMN02745168_0703 | SAMN02745168_1588 | Tetratricopeptide repeat-containing protein. | Protein of unknown function. | 0.822 |
| SMC40199.1 | rpoB | SAMN02745168_0703 | SAMN02745168_1024 | Tetratricopeptide repeat-containing protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.467 |
| SMC40199.1 | sigA | SAMN02745168_0703 | SAMN02745168_0827 | Tetratricopeptide repeat-containing protein. | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.702 |
| SMC56570.1 | SMC56592.1 | SAMN02745168_1587 | SAMN02745168_1588 | EDD domain protein, DegV family. | Protein of unknown function. | 0.782 |
| SMC56592.1 | SMC38022.1 | SAMN02745168_1588 | SAMN02745168_0586 | Protein of unknown function. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.893 |
| SMC56592.1 | SMC40199.1 | SAMN02745168_1588 | SAMN02745168_0703 | Protein of unknown function. | Tetratricopeptide repeat-containing protein. | 0.822 |
| SMC56592.1 | SMC56570.1 | SAMN02745168_1588 | SAMN02745168_1587 | Protein of unknown function. | EDD domain protein, DegV family. | 0.782 |
| SMC56592.1 | SMC57639.1 | SAMN02745168_1588 | SAMN02745168_1657 | Protein of unknown function. | DNA polymerase-3 subunit delta'. | 0.614 |
| SMC56592.1 | SMC87671.1 | SAMN02745168_1588 | SAMN02745168_0194 | Protein of unknown function. | L-glutamine synthetase. | 0.634 |
| SMC56592.1 | rpoA | SAMN02745168_1588 | SAMN02745168_2349 | Protein of unknown function. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.655 |
| SMC56592.1 | rpoB | SAMN02745168_1588 | SAMN02745168_1024 | Protein of unknown function. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.686 |
| SMC56592.1 | rpoC | SAMN02745168_1588 | SAMN02745168_1023 | Protein of unknown function. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.647 |
| SMC56592.1 | rpoZ | SAMN02745168_1588 | SAMN02745168_0708 | Protein of unknown function. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.647 |
| SMC56592.1 | sigA | SAMN02745168_1588 | SAMN02745168_0827 | Protein of unknown function. | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.674 |
| SMC57639.1 | SMC56592.1 | SAMN02745168_1657 | SAMN02745168_1588 | DNA polymerase-3 subunit delta'. | Protein of unknown function. | 0.614 |
| SMC57639.1 | rpoA | SAMN02745168_1657 | SAMN02745168_2349 | DNA polymerase-3 subunit delta'. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.497 |
| SMC57639.1 | sigA | SAMN02745168_1657 | SAMN02745168_0827 | DNA polymerase-3 subunit delta'. | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.552 |
| SMC87671.1 | SMC56592.1 | SAMN02745168_0194 | SAMN02745168_1588 | L-glutamine synthetase. | Protein of unknown function. | 0.634 |
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