STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC56850.1Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. (280 aa)    
Predicted Functional Partners:
SMC42009.1
Rod shape-determining protein MreB.
 
 
 0.993
SMC56814.1
Penicillin-binding protein 2.
 
 
 0.983
SMC56866.1
Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
  
  
 0.916
SMC42060.1
DNA repair protein RadC; Belongs to the UPF0758 family.
  
  
 0.867
SMC41544.1
Stage V sporulation protein D (sporulation-specific penicillin-binding protein).
 
 
 0.859
SMC57085.1
Septum site-determining protein MinD.
  
    0.806
SMC36120.1
Rod shape determining protein RodA; Belongs to the SEDS family.
 
  
 0.747
SMC56831.1
Rod shape-determining protein MreD; Manually curated.
       0.737
SMC56788.1
Glycosidase; Belongs to the glycosyl hydrolase 13 family.
     
 0.677
SMC42136.1
Penicillin-binding protein 1A.
  
 
 0.619
Your Current Organism:
Papillibacter cinnamivorans
NCBI taxonomy Id: 1122930
Other names: P. cinnamivorans DSM 12816, Papillibacter cinnamivorans DSM 12816
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.