STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC57731.1Signal transduction histidine kinase. (457 aa)    
Predicted Functional Partners:
SMC57728.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 0.968
SMC86644.1
Two-component system, OmpR family, response regulator VicR.
 0.929
SMC57830.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 0.908
SMC38022.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.906
SMC47232.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 0.904
SMC56074.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 0.902
SMC48237.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 0.894
SMC55513.1
Two-component system, OmpR family, response regulator VanR.
 0.894
SMC86898.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 0.888
SMC35920.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 0.887
Your Current Organism:
Papillibacter cinnamivorans
NCBI taxonomy Id: 1122930
Other names: P. cinnamivorans DSM 12816, Papillibacter cinnamivorans DSM 12816
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.