STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC59789.1S-layer homology domain-containing protein. (757 aa)    
Predicted Functional Partners:
SMC38022.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 
 0.929
SMC55793.1
Ankyrin repeat.
   
 0.922
SMC76167.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 
 0.879
SMC48258.1
Hypothetical protein.
  
 
 0.869
SMC59819.1
Biotin-lipoyl like.
 
   
 0.864
SMC36116.1
S-layer homology domain-containing protein.
  
  
 0.839
SMC70068.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
   
 
 0.825
SMC42537.1
Polysaccharide pyruvyl transferase CsaB.
  
 
 0.824
SMC40381.1
LysM domain-containing protein.
  
 
 0.823
SMC63485.1
Listeria/Bacterioides repeat-containing protein.
  
  
  0.821
Your Current Organism:
Papillibacter cinnamivorans
NCBI taxonomy Id: 1122930
Other names: P. cinnamivorans DSM 12816, Papillibacter cinnamivorans DSM 12816
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