STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC61049.1BFD-like [2Fe-2S] binding domain. (159 aa)    
Predicted Functional Partners:
SMC61002.1
Heavy-metal-associated domain-containing protein.
 
     0.635
SMC61042.1
Cd2+/Zn2+-exporting ATPase.
 
     0.597
SMC87676.1
Pyridine nucleotide-disulphide oxidoreductase.
  
 
 0.570
SMC60956.1
Hypothetical protein; Manually curated.
 
     0.570
glgA
Starch synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
  
  
 0.567
SMC40463.1
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunit.
  
 
 0.544
SMC65191.1
Hypothetical protein.
 
 
  0.525
SMC81883.1
MFS transporter, OFA family, oxalate/formate antiporter.
  
 
 0.498
SMC81888.1
Major Facilitator Superfamily protein.
  
 
 0.498
SMC34197.1
Glycine/D-amino acid oxidase.
    
 0.495
Your Current Organism:
Papillibacter cinnamivorans
NCBI taxonomy Id: 1122930
Other names: P. cinnamivorans DSM 12816, Papillibacter cinnamivorans DSM 12816
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