Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SMC61354.1 | SMC62349.1 | SAMN02745168_1806 | SAMN02745168_1870 | Type IV secretory pathway, VirB4 component. | Type IV secretion system protein VirD4. | 0.792 |
SMC61354.1 | SMC62403.1 | SAMN02745168_1806 | SAMN02745168_1874 | Type IV secretory pathway, VirB4 component. | Relaxase/Mobilisation nuclease domain-containing protein. | 0.593 |
SMC62270.1 | SMC62284.1 | SAMN02745168_1864 | SAMN02745168_1865 | Type IV secretory pathway, VirB4 component. | PrgI family protein. | 0.951 |
SMC62270.1 | SMC62324.1 | SAMN02745168_1864 | SAMN02745168_1868 | Type IV secretory pathway, VirB4 component. | Hypothetical protein. | 0.792 |
SMC62270.1 | SMC62333.1 | SAMN02745168_1864 | SAMN02745168_1869 | Type IV secretory pathway, VirB4 component. | Hypothetical protein; Manually curated. | 0.779 |
SMC62270.1 | SMC62349.1 | SAMN02745168_1864 | SAMN02745168_1870 | Type IV secretory pathway, VirB4 component. | Type IV secretion system protein VirD4. | 0.810 |
SMC62270.1 | SMC62380.1 | SAMN02745168_1864 | SAMN02745168_1872 | Type IV secretory pathway, VirB4 component. | Hypothetical protein. | 0.776 |
SMC62270.1 | SMC62395.1 | SAMN02745168_1864 | SAMN02745168_1873 | Type IV secretory pathway, VirB4 component. | Protein of unknown function. | 0.774 |
SMC62270.1 | SMC62403.1 | SAMN02745168_1864 | SAMN02745168_1874 | Type IV secretory pathway, VirB4 component. | Relaxase/Mobilisation nuclease domain-containing protein. | 0.785 |
SMC62270.1 | SMC62448.1 | SAMN02745168_1864 | SAMN02745168_1878 | Type IV secretory pathway, VirB4 component. | Toprim-like. | 0.780 |
SMC62270.1 | SMC62484.1 | SAMN02745168_1864 | SAMN02745168_1881 | Type IV secretory pathway, VirB4 component. | Hypothetical protein. | 0.734 |
SMC62284.1 | SMC62270.1 | SAMN02745168_1865 | SAMN02745168_1864 | PrgI family protein. | Type IV secretory pathway, VirB4 component. | 0.951 |
SMC62284.1 | SMC62324.1 | SAMN02745168_1865 | SAMN02745168_1868 | PrgI family protein. | Hypothetical protein. | 0.945 |
SMC62284.1 | SMC62333.1 | SAMN02745168_1865 | SAMN02745168_1869 | PrgI family protein. | Hypothetical protein; Manually curated. | 0.796 |
SMC62284.1 | SMC62349.1 | SAMN02745168_1865 | SAMN02745168_1870 | PrgI family protein. | Type IV secretion system protein VirD4. | 0.797 |
SMC62284.1 | SMC62380.1 | SAMN02745168_1865 | SAMN02745168_1872 | PrgI family protein. | Hypothetical protein. | 0.784 |
SMC62284.1 | SMC62395.1 | SAMN02745168_1865 | SAMN02745168_1873 | PrgI family protein. | Protein of unknown function. | 0.784 |
SMC62284.1 | SMC62403.1 | SAMN02745168_1865 | SAMN02745168_1874 | PrgI family protein. | Relaxase/Mobilisation nuclease domain-containing protein. | 0.784 |
SMC62284.1 | SMC62448.1 | SAMN02745168_1865 | SAMN02745168_1878 | PrgI family protein. | Toprim-like. | 0.783 |
SMC62284.1 | SMC62484.1 | SAMN02745168_1865 | SAMN02745168_1881 | PrgI family protein. | Hypothetical protein. | 0.772 |
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