STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC63354.14Fe-4S binding domain-containing protein. (234 aa)    
Predicted Functional Partners:
SMC90076.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.855
SMC55538.1
NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein.
    
 0.806
SMC55519.1
NAD(P)-dependent iron-only hydrogenase catalytic subunit.
   
 0.779
SMC69803.1
NADH-quinone oxidoreductase subunit G.
   
 0.779
SMC63346.1
cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases.
 
     0.771
SMC63359.1
Hypothetical protein.
       0.747
SMC55567.1
NAD(P)-dependent iron-only hydrogenase diaphorase component iron-sulfur protein.
   
 0.717
SMC69814.1
Thioredoxin-like [2Fe-2S] ferredoxin.
   
 0.717
SMC63364.1
Rubredoxin.
       0.682
SMC63405.1
Ferredoxin.
    
 0.673
Your Current Organism:
Papillibacter cinnamivorans
NCBI taxonomy Id: 1122930
Other names: P. cinnamivorans DSM 12816, Papillibacter cinnamivorans DSM 12816
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.