STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC63405.1Ferredoxin. (62 aa)    
Predicted Functional Partners:
SMC90076.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.931
hcp
Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
       0.714
SMC55538.1
NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein.
     
 0.698
SMC63364.1
Rubredoxin.
  
  
 0.674
SMC63354.1
4Fe-4S binding domain-containing protein.
    
 0.673
SMC63359.1
Hypothetical protein.
       0.598
SMC69793.1
4Fe-4S dicluster domain-containing protein.
     
 0.574
SMC63419.1
HD domain-containing protein.
 
     0.522
SMC64280.1
Dihydropyrimidine dehydrogenase (NAD+) subunit PreA.
    
 0.519
SMC87676.1
Pyridine nucleotide-disulphide oxidoreductase.
    
 0.453
Your Current Organism:
Papillibacter cinnamivorans
NCBI taxonomy Id: 1122930
Other names: P. cinnamivorans DSM 12816, Papillibacter cinnamivorans DSM 12816
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.