STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC70049.1HDIG domain-containing protein. (354 aa)    
Predicted Functional Partners:
SMC38022.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 0.987
SMC70038.1
PAS domain S-box-containing protein.
 
 0.985
SMC91203.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 
 0.981
SMC70068.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
 0.973
SMC35792.1
Flagellar motor switch protein FliN/FliY.
  
 
  0.934
SMC76167.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
 
0.926
SMC70060.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 
 0.851
SMC49349.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 
 0.834
SMC37204.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 
 0.819
SMC37980.1
Diguanylate cyclase.
 
 
 0.816
Your Current Organism:
Papillibacter cinnamivorans
NCBI taxonomy Id: 1122930
Other names: P. cinnamivorans DSM 12816, Papillibacter cinnamivorans DSM 12816
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