Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SMC42638.1 | SMC55887.1 | SAMN02745168_0892 | SAMN02745168_1514 | Riboflavin transporter FmnP; Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins; Belongs to the prokaryotic riboflavin transporter (P-RFT) (TC 2.A.87) family. | Thiamine transporter. | 0.590 |
| SMC42638.1 | SMC73103.1 | SAMN02745168_0892 | SAMN02745168_2250 | Riboflavin transporter FmnP; Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins; Belongs to the prokaryotic riboflavin transporter (P-RFT) (TC 2.A.87) family. | Uncharacterized membrane protein. | 0.590 |
| SMC55887.1 | SMC42638.1 | SAMN02745168_1514 | SAMN02745168_0892 | Thiamine transporter. | Riboflavin transporter FmnP; Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins; Belongs to the prokaryotic riboflavin transporter (P-RFT) (TC 2.A.87) family. | 0.590 |
| SMC55887.1 | SMC73103.1 | SAMN02745168_1514 | SAMN02745168_2250 | Thiamine transporter. | Uncharacterized membrane protein. | 0.420 |
| SMC73093.1 | SMC73103.1 | SAMN02745168_2249 | SAMN02745168_2250 | UTP--glucose-1-phosphate uridylyltransferase. | Uncharacterized membrane protein. | 0.524 |
| SMC73103.1 | SMC42638.1 | SAMN02745168_2250 | SAMN02745168_0892 | Uncharacterized membrane protein. | Riboflavin transporter FmnP; Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins; Belongs to the prokaryotic riboflavin transporter (P-RFT) (TC 2.A.87) family. | 0.590 |
| SMC73103.1 | SMC55887.1 | SAMN02745168_2250 | SAMN02745168_1514 | Uncharacterized membrane protein. | Thiamine transporter. | 0.420 |
| SMC73103.1 | SMC73093.1 | SAMN02745168_2250 | SAMN02745168_2249 | Uncharacterized membrane protein. | UTP--glucose-1-phosphate uridylyltransferase. | 0.524 |
| SMC73103.1 | SMC73117.1 | SAMN02745168_2250 | SAMN02745168_2251 | Uncharacterized membrane protein. | Anti sigma-E protein RseA, N-terminal domain. | 0.438 |
| SMC73103.1 | SMC73163.1 | SAMN02745168_2250 | SAMN02745168_2252 | Uncharacterized membrane protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.438 |
| SMC73103.1 | SMC73178.1 | SAMN02745168_2250 | SAMN02745168_2253 | Uncharacterized membrane protein. | tRNA-dihydrouridine synthase B; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.438 |
| SMC73103.1 | queA | SAMN02745168_2250 | SAMN02745168_0012 | Uncharacterized membrane protein. | S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | 0.520 |
| SMC73117.1 | SMC73103.1 | SAMN02745168_2251 | SAMN02745168_2250 | Anti sigma-E protein RseA, N-terminal domain. | Uncharacterized membrane protein. | 0.438 |
| SMC73117.1 | SMC73163.1 | SAMN02745168_2251 | SAMN02745168_2252 | Anti sigma-E protein RseA, N-terminal domain. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.877 |
| SMC73117.1 | SMC73178.1 | SAMN02745168_2251 | SAMN02745168_2253 | Anti sigma-E protein RseA, N-terminal domain. | tRNA-dihydrouridine synthase B; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.777 |
| SMC73163.1 | SMC73103.1 | SAMN02745168_2252 | SAMN02745168_2250 | RNA polymerase sigma-70 factor, ECF subfamily. | Uncharacterized membrane protein. | 0.438 |
| SMC73163.1 | SMC73117.1 | SAMN02745168_2252 | SAMN02745168_2251 | RNA polymerase sigma-70 factor, ECF subfamily. | Anti sigma-E protein RseA, N-terminal domain. | 0.877 |
| SMC73163.1 | SMC73178.1 | SAMN02745168_2252 | SAMN02745168_2253 | RNA polymerase sigma-70 factor, ECF subfamily. | tRNA-dihydrouridine synthase B; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.789 |
| SMC73178.1 | SMC73103.1 | SAMN02745168_2253 | SAMN02745168_2250 | tRNA-dihydrouridine synthase B; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Uncharacterized membrane protein. | 0.438 |
| SMC73178.1 | SMC73117.1 | SAMN02745168_2253 | SAMN02745168_2251 | tRNA-dihydrouridine synthase B; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Anti sigma-E protein RseA, N-terminal domain. | 0.777 |
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