STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC76469.1Polar amino acid transport system substrate-binding protein. (274 aa)    
Predicted Functional Partners:
SMC76478.1
Amino acid ABC transporter membrane protein, PAAT family.
 0.997
SMC46236.1
L-cystine transport system permease protein.
 0.992
SMC87635.1
Polar amino acid transport system permease protein.
 0.988
SMC46205.1
L-cystine transport system permease protein.
 0.988
SMC89017.1
Putative glutamine transport system permease protein.
 0.987
SMC89029.1
Putative glutamine transport system permease protein.
 0.987
SMC76093.1
Putative lysine transport system permease protein; Manually curated.
 0.987
SMC76490.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 0.944
SMC87638.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 0.881
SMC89039.1
Putative glutamine transport system ATP-binding protein.
 0.873
Your Current Organism:
Papillibacter cinnamivorans
NCBI taxonomy Id: 1122930
Other names: P. cinnamivorans DSM 12816, Papillibacter cinnamivorans DSM 12816
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.