Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SMC55519.1 | SMC55538.1 | SAMN02745168_1473 | SAMN02745168_1474 | NAD(P)-dependent iron-only hydrogenase catalytic subunit. | NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein. | 0.999 |
SMC55519.1 | SMC68739.1 | SAMN02745168_1473 | SAMN02745168_2057 | NAD(P)-dependent iron-only hydrogenase catalytic subunit. | NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase. | 0.836 |
SMC55519.1 | SMC69793.1 | SAMN02745168_1473 | SAMN02745168_2095 | NAD(P)-dependent iron-only hydrogenase catalytic subunit. | 4Fe-4S dicluster domain-containing protein. | 0.997 |
SMC55519.1 | SMC76426.1 | SAMN02745168_1473 | SAMN02745168_2378 | NAD(P)-dependent iron-only hydrogenase catalytic subunit. | CoA-disulfide reductase; Belongs to the sulfur carrier protein TusA family. | 0.836 |
SMC55519.1 | SMC76569.1 | SAMN02745168_1473 | SAMN02745168_2391 | NAD(P)-dependent iron-only hydrogenase catalytic subunit. | Anaerobic selenocysteine-containing dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.960 |
SMC55519.1 | SMC76581.1 | SAMN02745168_1473 | SAMN02745168_2392 | NAD(P)-dependent iron-only hydrogenase catalytic subunit. | 4Fe-4S dicluster domain-containing protein. | 0.834 |
SMC55519.1 | SMC80692.1 | SAMN02745168_1473 | SAMN02745168_2592 | NAD(P)-dependent iron-only hydrogenase catalytic subunit. | NADPH-dependent glutamate synthase beta chain. | 0.974 |
SMC55519.1 | SMC87678.1 | SAMN02745168_1473 | SAMN02745168_0197 | NAD(P)-dependent iron-only hydrogenase catalytic subunit. | Carbon-monoxide dehydrogenase iron sulfur subunit. | 0.953 |
SMC55519.1 | SMC90076.1 | SAMN02745168_1473 | SAMN02745168_0259 | NAD(P)-dependent iron-only hydrogenase catalytic subunit. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.977 |
SMC55538.1 | SMC55519.1 | SAMN02745168_1474 | SAMN02745168_1473 | NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein. | NAD(P)-dependent iron-only hydrogenase catalytic subunit. | 0.999 |
SMC55538.1 | SMC68739.1 | SAMN02745168_1474 | SAMN02745168_2057 | NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein. | NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase. | 0.901 |
SMC55538.1 | SMC69793.1 | SAMN02745168_1474 | SAMN02745168_2095 | NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein. | 4Fe-4S dicluster domain-containing protein. | 0.953 |
SMC55538.1 | SMC76426.1 | SAMN02745168_1474 | SAMN02745168_2378 | NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein. | CoA-disulfide reductase; Belongs to the sulfur carrier protein TusA family. | 0.901 |
SMC55538.1 | SMC76569.1 | SAMN02745168_1474 | SAMN02745168_2391 | NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein. | Anaerobic selenocysteine-containing dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.941 |
SMC55538.1 | SMC76581.1 | SAMN02745168_1474 | SAMN02745168_2392 | NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein. | 4Fe-4S dicluster domain-containing protein. | 0.940 |
SMC55538.1 | SMC80692.1 | SAMN02745168_1474 | SAMN02745168_2592 | NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein. | NADPH-dependent glutamate synthase beta chain. | 0.994 |
SMC55538.1 | SMC87678.1 | SAMN02745168_1474 | SAMN02745168_0197 | NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein. | Carbon-monoxide dehydrogenase iron sulfur subunit. | 0.834 |
SMC55538.1 | SMC90076.1 | SAMN02745168_1474 | SAMN02745168_0259 | NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.985 |
SMC55538.1 | tuf | SAMN02745168_1474 | SAMN02745168_1018 | NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein. | Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. | 0.848 |
SMC68739.1 | SMC55519.1 | SAMN02745168_2057 | SAMN02745168_1473 | NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase. | NAD(P)-dependent iron-only hydrogenase catalytic subunit. | 0.836 |
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