Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SMC40695.1 | SMC81942.1 | SAMN02745168_0741 | SAMN02745168_2678 | ABC-2 type transport system permease protein. | Nitroreductase. | 0.527 |
SMC47381.1 | SMC73235.1 | SAMN02745168_1056 | SAMN02745168_2257 | NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family. | Riboflavin kinase / FMN adenylyltransferase; Belongs to the ribF family. | 0.441 |
SMC47381.1 | SMC81942.1 | SAMN02745168_1056 | SAMN02745168_2678 | NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family. | Nitroreductase. | 0.502 |
SMC64194.1 | SMC68739.1 | SAMN02745168_1953 | SAMN02745168_2057 | Catechol 2,3-dioxygenase. | NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase. | 0.561 |
SMC64194.1 | SMC76426.1 | SAMN02745168_1953 | SAMN02745168_2378 | Catechol 2,3-dioxygenase. | CoA-disulfide reductase; Belongs to the sulfur carrier protein TusA family. | 0.561 |
SMC64194.1 | SMC81942.1 | SAMN02745168_1953 | SAMN02745168_2678 | Catechol 2,3-dioxygenase. | Nitroreductase. | 0.500 |
SMC64194.1 | birA | SAMN02745168_1953 | SAMN02745168_1424 | Catechol 2,3-dioxygenase. | Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | 0.549 |
SMC64194.1 | tadA | SAMN02745168_1953 | SAMN02745168_1596 | Catechol 2,3-dioxygenase. | tRNA(adenine34) deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | 0.528 |
SMC68739.1 | SMC64194.1 | SAMN02745168_2057 | SAMN02745168_1953 | NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase. | Catechol 2,3-dioxygenase. | 0.561 |
SMC68739.1 | SMC75998.1 | SAMN02745168_2057 | SAMN02745168_2354 | NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase. | Lactoylglutathione lyase. | 0.561 |
SMC68739.1 | SMC76426.1 | SAMN02745168_2057 | SAMN02745168_2378 | NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase. | CoA-disulfide reductase; Belongs to the sulfur carrier protein TusA family. | 0.999 |
SMC68739.1 | SMC81942.1 | SAMN02745168_2057 | SAMN02745168_2678 | NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase. | Nitroreductase. | 0.549 |
SMC73235.1 | SMC47381.1 | SAMN02745168_2257 | SAMN02745168_1056 | Riboflavin kinase / FMN adenylyltransferase; Belongs to the ribF family. | NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family. | 0.441 |
SMC73235.1 | SMC81942.1 | SAMN02745168_2257 | SAMN02745168_2678 | Riboflavin kinase / FMN adenylyltransferase; Belongs to the ribF family. | Nitroreductase. | 0.474 |
SMC73235.1 | birA | SAMN02745168_2257 | SAMN02745168_1424 | Riboflavin kinase / FMN adenylyltransferase; Belongs to the ribF family. | Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | 0.492 |
SMC75998.1 | SMC68739.1 | SAMN02745168_2354 | SAMN02745168_2057 | Lactoylglutathione lyase. | NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase. | 0.561 |
SMC75998.1 | SMC76426.1 | SAMN02745168_2354 | SAMN02745168_2378 | Lactoylglutathione lyase. | CoA-disulfide reductase; Belongs to the sulfur carrier protein TusA family. | 0.561 |
SMC75998.1 | SMC81942.1 | SAMN02745168_2354 | SAMN02745168_2678 | Lactoylglutathione lyase. | Nitroreductase. | 0.524 |
SMC75998.1 | birA | SAMN02745168_2354 | SAMN02745168_1424 | Lactoylglutathione lyase. | Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | 0.549 |
SMC75998.1 | tadA | SAMN02745168_2354 | SAMN02745168_1596 | Lactoylglutathione lyase. | tRNA(adenine34) deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | 0.542 |
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