STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI41683.1Hypothetical protein. (316 aa)    
Predicted Functional Partners:
SHI58968.1
Hypothetical protein.
  
     0.774
SHJ43619.1
TadE-like protein.
  
     0.774
SHI63476.1
Hypothetical protein.
  
     0.773
SHJ43153.1
Hypothetical protein.
  
     0.770
SHI47756.1
Preprotein translocase subunit SecE; Belongs to the SecE/SEC61-gamma family.
  
     0.769
SHI58917.1
Hypothetical protein.
  
     0.769
SHJ43257.1
Hypothetical protein.
  
     0.766
SHJ49390.1
Hypothetical protein.
  
     0.763
SHI33923.1
Cell division protein ZapA.
  
     0.757
SHI45028.1
Protein of unknown function.
  
     0.757
Your Current Organism:
Parasporobacterium paucivorans
NCBI taxonomy Id: 1122934
Other names: P. paucivorans DSM 15970, Parasporobacterium paucivorans DSM 15970
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.