STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI42916.1Hypothetical protein. (370 aa)    
Predicted Functional Partners:
SHI42968.1
Hypothetical protein.
       0.734
SHI42872.1
Hypothetical protein.
       0.729
SHI42822.1
Hypothetical protein.
       0.727
SHI43010.1
Phage minor capsid protein 2.
       0.512
SHI43104.1
Phage terminase, large subunit, PBSX family.
       0.498
SHI42777.1
Minor capsid protein.
       0.488
SHI42727.1
Hypothetical protein.
       0.485
SHI43052.1
Phage portal protein, putative, A118 family.
       0.484
SHI42677.1
Hypothetical protein.
       0.463
SHI43147.1
Hypothetical protein.
       0.456
Your Current Organism:
Parasporobacterium paucivorans
NCBI taxonomy Id: 1122934
Other names: P. paucivorans DSM 15970, Parasporobacterium paucivorans DSM 15970
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.