STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI95431.1Ni,Fe-hydrogenase III large subunit. (521 aa)    
Predicted Functional Partners:
SHI95398.1
Ni,Fe-hydrogenase III small subunit.
 0.999
SHI95468.1
Hydrogenase-4 component F.
 0.999
SHI95507.1
Hydrogenase-4 component E.
 
 
 0.999
SHI95545.1
Formate hydrogenlyase subunit 4.
 
 0.999
SHI95582.1
Proton-conducting membrane transporter.
 
 0.999
SHJ63716.1
Ech hydrogenase subunit C.
 0.999
SHJ63681.1
Ech hydrogenase subunit B.
 
 0.997
SHI93723.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 0.993
SHI30100.1
NAD-dependent formate dehydrogenase catalytic subunit.
  
 0.990
SHI88713.1
NAD-dependent formate dehydrogenase catalytic subunit.
  
 0.990
Your Current Organism:
Parasporobacterium paucivorans
NCBI taxonomy Id: 1122934
Other names: P. paucivorans DSM 15970, Parasporobacterium paucivorans DSM 15970
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.