STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000711225_03877Unannotated protein. (439 aa)    
Predicted Functional Partners:
GCA_000711225_03878
Unannotated protein.
       0.730
GCA_000711225_03880
Unannotated protein.
       0.703
GCA_000711225_03879
Unannotated protein.
       0.690
GCA_000711225_03876
Unannotated protein.
       0.645
GCA_000711225_02847
Unannotated protein.
  
    0.581
GCA_000711225_02846
Unannotated protein.
  
    0.554
GCA_000711225_02352
Unannotated protein.
  
    0.538
GCA_000711225_02845
Unannotated protein.
   
  
 0.491
GCA_000711225_02848
Unannotated protein.
   
  
 0.491
GCA_000711225_00405
Unannotated protein.
   
    0.487
Your Current Organism:
Pelobacter seleniigenes
NCBI taxonomy Id: 1122946
Other names: P. seleniigenes DSM 18267, Pelobacter seleniigenes DSM 18267
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.