STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000422965_00227Unannotated protein. (81 aa)    
Predicted Functional Partners:
GCA_000422965_01922
Unannotated protein.
 
 0.998
GCA_000422965_01836
Unannotated protein.
   
    0.819
GCA_000422965_01509
Unannotated protein.
 
  
 0.781
GCA_000422965_01725
Unannotated protein.
  
  
 0.757
GCA_000422965_00228
Unannotated protein.
       0.732
GCA_000422965_01173
Unannotated protein.
  
  
 0.722
GCA_000422965_04171
Unannotated protein.
 
  
 0.608
GCA_000422965_00226
Unannotated protein.
  
    0.576
GCA_000422965_02360
Unannotated protein.
  
    0.573
GCA_000422965_00225
Unannotated protein.
     
 0.550
Your Current Organism:
Pleomorphomonas oryzae
NCBI taxonomy Id: 1122963
Other names: P. oryzae DSM 16300, Pleomorphomonas oryzae DSM 16300
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.